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  5. Sacu_v1.1_s0001.g000460

Sacu_v1.1_s0001.g000460 (ATIM)


Aliases : ATIM

Description : not classified & original description: CDS=1-3306


Gene families : OG0005553 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005553_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0001.g000460
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene09822.t1 Aspi01Gene09822 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_19077 ATIM no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g22100.1 ATIM no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g28887 ATIM not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g007800.3.1 ATIM, Solyc03g007800 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g37319 ATIM not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR006906 Timeless_N 87 292
No external refs found!