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  5. Sacu_v1.1_s0001.g000446

Sacu_v1.1_s0001.g000446


Description : bHLH-type transcription factor & original description: CDS=1-1233


Gene families : OG0000768 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000768_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0001.g000446
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272070 FMA,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AMTR_s00008p00198780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AMTR_s00015p00239460 SPCH,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Ala_g25773 FMA bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03090 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09821 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010552 FMA bHLH-type transcription factor & original description: CDS=1-1698 0.04 OrthoFinder output from all 47 species
Ceric.21G040300.1 Ceric.21G040300 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g02905 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04681 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_17233 FMA transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os02g46560.1 LOC_Os02g46560 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Lfl_g35034 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_120602g0010 SPCH transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_194157g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_57244g0010 FMA transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Ppi_g63342 FMA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015494_P002 Zm00001e015494 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e041403_P001 Zm00001e041403 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 213 263
No external refs found!