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  5. Sacu_v1.1_s0001.g000340

Sacu_v1.1_s0001.g000340 (EMB144, CIN4, COP10, FUS9)


Aliases : EMB144, CIN4, COP10, FUS9

Description : accessory component *(GUN4) of magnesium-chelatase complex & original description: CDS=82-633


Gene families : OG0000200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0001.g000340

Target Alias Description ECC score Gene Family Method Actions
Adi_g029541 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g78294 EMB144, CIN4, COP10, FUS9 component *(COP10) of CDDD substrate adaptor module of... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020562.32 ATUBC11, UBC11 Protein degradation.peptide... 0.01 OrthoFinder output from all 47 species
Cre16.g693700 UBC10 Protein degradation.peptide... 0.01 OrthoFinder output from all 47 species
Lfl_g06390 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31695 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
MA_161292g0010 ATUBC11, UBC11 Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum... 0.01 OrthoFinder output from all 47 species
MA_505498g0010 ATUBC11, UBC11 Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum... 0.01 OrthoFinder output from all 47 species
Sam_g11820 No alias E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g066080.3.1 ATUBC11, UBC11,... conjugation E2 protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0007029 endoplasmic reticulum organization IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0018580 nitronate monooxygenase activity IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008629 GUN4-like 73 220
IPR000608 UBQ-conjugat_E2 57 204
No external refs found!