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  5. Sacu_v1.1_s0001.g000305

Sacu_v1.1_s0001.g000305


Description : not classified & original description: CDS=1572-3209


Gene families : OG0000885 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000885_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0001.g000305

Target Alias Description ECC score Gene Family Method Actions
AT1G61670 No alias Lung seven transmembrane receptor family protein 0.04 OrthoFinder output from all 47 species
Azfi_s0487.g073471 No alias not classified & original description: CDS=317-1819 0.04 OrthoFinder output from all 47 species
MA_22562g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8842289g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Ore_g06229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR009637 GPR107/GPR108-like 203 489
No external refs found!