Sacu_v1.1_s0001.g000162


Description : not classified & original description: CDS=48-2129


Gene families : OG0001585 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001585_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0001.g000162
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00052440 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G47440 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G62570 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G02100 No alias Heat shock protein DnaJ with tetratricopeptide repeat 0.07 OrthoFinder output from all 47 species
Adi_g010378 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21471 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11741 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10830.t1 Aspi01Gene10830 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33036.t1 Aspi01Gene33036 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64146.t1 Aspi01Gene64146 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0129.g048903 No alias not classified & original description: CDS=127-2157 0.04 OrthoFinder output from all 47 species
Cba_g03335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10190 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.05G060400.1 Ceric.05G060400 not classified & original description: pacid=50579138... 0.03 OrthoFinder output from all 47 species
Ceric.07G091800.1 Ceric.07G091800 not classified & original description: pacid=50627264... 0.06 OrthoFinder output from all 47 species
Ceric.12G062700.1 Ceric.12G062700 not classified & original description: pacid=50600807... 0.06 OrthoFinder output from all 47 species
Ceric.32G043600.1 Ceric.32G043600 not classified & original description: pacid=50597338... 0.04 OrthoFinder output from all 47 species
Dac_g01628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028103001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os03g19200.1 LOC_Os03g19200 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os07g49000.1 LOC_Os07g49000 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Len_g14580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08052 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10431486g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g03965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01137 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g02070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g29002 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g36571 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g11323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10571 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61556 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013323 No alias not classified & original description: CDS=84-1640 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s3471.g028815 No alias not classified & original description: CDS=84-1640 0.03 OrthoFinder output from all 47 species
Spa_g07917 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g19696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29250 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g52632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09885 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e011009_P001 Zm00001e011009 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!