Sacu_v1.1_s0001.g000070 (tny)

Aliases : tny

Description : subgroup ERF-III transcription factor & original description: CDS=1-741

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0001.g000070

Target	Alias	Description	ECC score	Gene Family Method
Adi_g008628	DEAR1, CEJ1, ATERF#011	subgroup ERF-II transcription factor *(ERF19/20) &...	0.03	OrthoFinder output from all 47 species
Adi_g035511	ERF110	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g36635	ERF72, EBP, ATEBP, RAP2.3	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Als_g37143	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Als_g38843	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g50026	TINY2	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene05675.t1	Aspi01Gene05675	subgroup ERF-III transcription factor & original...	0.05	OrthoFinder output from all 47 species
Aspi01Gene21088.t1	Aspi01Gene21088	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene34451.t1	Aspi01Gene34451	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene44272.t1	ERF7, ATERF7,...	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene47263.t1	tny, Aspi01Gene47263	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene55263.t1	RAP2.11, Aspi01Gene55263	transcription factor *(ERN1) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene56610.t1	DREB26, Aspi01Gene56610	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene56611.t1	DREB26, Aspi01Gene56611	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0075.g037615	No alias	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Cba_g11763	No alias	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.03	OrthoFinder output from all 47 species
Dde_g01445	CRF4	subgroup ERF-VI transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g00959	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.04	OrthoFinder output from all 47 species
Ehy_g25390	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
LOC_Os01g12440.1	TMO3, CRF2,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
LOC_Os02g51670.1	RAP2.4, LOC_Os02g51670	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Len_g13204	No alias	subgroup ERF-V transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Len_g55869	RAP2.11	transcription factor *(ERN1) & original description: none	0.03	OrthoFinder output from all 47 species
MA_10274g0010	Rap2.6L	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Pir_g31214	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010831	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014837	tny	subgroup ERF-III transcription factor & original...	0.04	OrthoFinder output from all 47 species
Sam_g15417	No alias	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Solyc01g091760.3.1	RAP2.11, Solyc01g091760	transcription factor (ERF). transcription factor (ERN1)	0.02	OrthoFinder output from all 47 species
Solyc03g093540.1.1	Solyc03g093540	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Solyc08g078180.1.1	ERF2, ATERF2,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Solyc09g089910.1.1	Solyc09g089910	transcription factor (ERF). transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Zm00001e030090_P001	DEAR3, Zm00001e030090	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Zm00001e031783_P001	ERF110, Zm00001e031783	transcription factor (ERF)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006825	copper ion transport	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0035434	copper ion transmembrane transport	IEP	HCCA
MF	GO:0043743	LPPG:FO 2-phospho-L-lactate transferase activity	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	69	119

External Links

No external refs found!

Sacu_v1.1_s0001.g000070 (tny)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation