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  5. Sacu_v1.1_s0001.g000065

Sacu_v1.1_s0001.g000065


Description : not classified & original description: CDS=241-1233


Gene families : OG0001861 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001861_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0001.g000065
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT2G03810 No alias 18S pre-ribosomal assembly protein gar2-related 0.02 OrthoFinder output from all 47 species
Aob_g07947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66935.t1 Aspi01Gene66935 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G066400.1 Ceric.05G066400 not classified & original description: pacid=50579078... 0.01 OrthoFinder output from all 47 species
Dcu_g01826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g39240.1 LOC_Os04g39240 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g11678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!