MA_10428715g0010

Description : regulatory component RPT1 of 26S proteasome

Gene families : OG_01_0003582 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003582_tree ,
OG_02_0003574 (LandPlants) Phylogenetic Tree(s): OG_02_0003574_tree ,
OG_03_0006805 (SeedPlants) Phylogenetic Tree(s): OG_03_0006805_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10428715g0010
Cluster	HCCA: Cluster_388

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00131p00084690	evm_27.TU.AmTr_v1...	Protein degradation.26S proteasome.regulatory...	0.03	Archaeplastida
Cre14.g625400	No alias	Protein degradation.26S proteasome.regulatory...	0.04	Archaeplastida
GSVIVT01016655001	No alias	Protein degradation.26S proteasome.regulatory...	0.02	Archaeplastida
Mp2g04840.1	No alias	regulatory component RPT1 of 26S proteasome	0.05	Archaeplastida
Pp3c20_1430V3.1	No alias	regulatory particle triple-A 1A	0.04	Archaeplastida
Pp3c23_18300V3.1	No alias	regulatory particle triple-A 1A	0.02	Archaeplastida
Zm00001e023743_P001	No alias	regulatory component RPT1 of 26S proteasome	0.02	Archaeplastida
GSVIVT01016655001	No alias	Protein degradation.26S proteasome.regulatory...	0.02	LandPlants
Mp2g04840.1	No alias	regulatory component RPT1 of 26S proteasome	0.05	LandPlants
Pp3c20_1430V3.1	No alias	regulatory particle triple-A 1A	0.04	LandPlants
Pp3c23_18300V3.1	No alias	regulatory particle triple-A 1A	0.02	LandPlants
Zm00001e023743_P001	No alias	regulatory component RPT1 of 26S proteasome	0.02	LandPlants
GSVIVT01016655001	No alias	Protein degradation.26S proteasome.regulatory...	0.02	SeedPlants
Zm00001e016066_P001	No alias	regulatory component RPT1 of 26S proteasome	0.01	SeedPlants
Zm00001e023743_P001	No alias	regulatory component RPT1 of 26S proteasome	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	204	336
IPR041569	AAA_lid_3	359	403

External Links

No external refs found!