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  5. Azfi_s3508.g115947

Azfi_s3508.g115947 (AtMYB50, MYB50)


Aliases : AtMYB50, MYB50

Description : not classified & original description: CDS=164-592


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s3508.g115947

Target Alias Description ECC score Gene Family Method Actions
AT2G47460 ATMYB12, PFG1, MYB12 myb domain protein 12 0.02 OrthoFinder output from all 47 species
AT3G01140 MYB106, NOK, AtMYB106 myb domain protein 106 0.02 OrthoFinder output from all 47 species
AT3G46130 ATMYB48-1,... myb domain protein 48 0.04 OrthoFinder output from all 47 species
AT3G61250 AtMYB17, MYB17 myb domain protein 17 0.02 OrthoFinder output from all 47 species
Als_g08917 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.02 OrthoFinder output from all 47 species
Als_g32240 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.01 OrthoFinder output from all 47 species
Aop_g04469 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21421.t1 AtMYB20, MYB20,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene30932.t1 AtMYB50, MYB50,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0001.g000538 AtMYB107, MYB107 not classified & original description: CDS=483-809 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012145 MYB103, AtMYB103 not classified & original description: CDS=123-1598 0.02 OrthoFinder output from all 47 species
Azfi_s0059.g034689 No alias not classified & original description: CDS=1-294 0.02 OrthoFinder output from all 47 species
Ceric.01G031100.1 ATMYB4, MYB4,... not classified & original description: pacid=50590849... 0.01 OrthoFinder output from all 47 species
Ceric.17G059200.1 ATMYB61, MYB61,... not classified & original description: pacid=50617474... 0.02 OrthoFinder output from all 47 species
Dac_g14836 ATMYB61, MYB61 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04758 ATMYB61, MYB61 MYB class-R2R3 subgroup-13 transcription factor &... 0.02 OrthoFinder output from all 47 species
Dcu_g20359 ATMYB61, MYB61 MYB class-R2R3 subgroup-13 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ehy_g04306 AtMYB50, MYB50 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01035463001 MYB32, AtMYB32 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Gb_15814 MYB41, AtMYB41 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
LOC_Os01g51260.1 ATY53, ATMYB67,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os03g55300.1 LOC_Os03g55300 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g38740.1 MYB106, NOK,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Len_g23553 ATMYB46, MYB46 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g43506 MYB36, AtMYB36 MYB class-R2R3 subgroup-14 transcription factor &... 0.02 OrthoFinder output from all 47 species
Pir_g47441 ATMYB5, MYB5 MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49383 ATMYB48-1,... MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g111500.3.1 ATMYB4, MYB4,... transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
Solyc02g082040.3.1 ATY53, ATMYB67,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc11g072060.3.1 AtMYB97, MYB97,... transcription factor (MYB) 0.08 OrthoFinder output from all 47 species
Solyc11g073120.2.1 ATMYB48-1,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Spa_g29387 ATMYB94, ATMYBCP70, MYB94 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g46686 MYB103,... transcriptional regulator *(MS188) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47695 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e018186_P001 ATMYB59-1,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e020004_P001 ATY53, ATMYB67,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e023100_P001 MYB19, AtMYB19,... transcription factor (MYB) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 50 92
IPR001005 SANT/Myb 3 33
No external refs found!