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  5. Azfi_s3353.g115478

Azfi_s3353.g115478 (ATLDA, ATPU1, LDA, PU1)


Aliases : ATLDA, ATPU1, LDA, PU1

Description : starch-debranching pullulan-6-glucanohydrolase *(PU1) & original description: CDS=1-756


Gene families : OG0004422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004422_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s3353.g115478

Target Alias Description ECC score Gene Family Method Actions
Ppi_g31091 ATLDA, ATPU1, LDA, PU1 starch-debranching pullulan-6-glucanohydrolase *(PU1) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
InterPro domains Description Start Stop
IPR024561 Pullul_strch_C 79 248
No external refs found!