Solyc09g055930.3.1 (Solyc09g055930.3)


Aliases : Solyc09g055930.3

Description : 10.8.99 cell wall.pectin*esterases.misc Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein. SKU5 similar 3 (sks3)


Gene families : OG_01_0001880 (Gene family) Phylogenetic Tree(s): OG0001880_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc09g055930.3.1
Cluster HCCA cluster: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AT4G12420 SKU5 Cupredoxin superfamily protein 0.04 Gene family
GSVIVT01001270001 No alias 33.99 development.unspecified Encodes a protein of... 0.06 Gene family
LOC_Os06g01490 Os06g0104300 33.99 development.unspecified Encodes a protein of... 0.03 Gene family
LOC_Os10g36390 Os10g0508000 33.99 development.unspecified Encodes a protein of... 0.02 Gene family
Zm00001d045599 GRMZM2G049693 33.99 development.unspecified Encodes a protein of... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0055114 oxidation-reduction process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011707 Cu-oxidase_3 29 143
IPR011706 Cu-oxidase_2 399 528
IPR001117 Cu-oxidase 156 308
No external refs found!