Azfi_s3133.g114643 (AGO4, OCP11)

Aliases : AGO4, OCP11

Description : not classified & original description: CDS=1-2562

Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s3133.g114643

Target	Alias	Description	ECC score	Gene Family Method
Dcu_g16554	AGO1	miRNA recruiting factor (AGO) of RNA-induced silencing...	0.03	OrthoFinder output from all 47 species
Dde_g50648	AGO1	miRNA recruiting factor (AGO) of RNA-induced silencing...	0.03	OrthoFinder output from all 47 species
LOC_Os01g16870.3	AGO4, OCP11,...	siRNA-integrating factor (AGO)	0.03	OrthoFinder output from all 47 species
LOC_Os06g39640.1	PNH, AGO10, ZLL,...	RIS-Complex miRNA recruiting factor (AGO1)	0.03	OrthoFinder output from all 47 species
LOC_Os07g09020.1	AGO5, LOC_Os07g09020	Protein argonaute 14 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
Sam_g25176	No alias	siRNA-integrating factor *(AGO) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004386	helicase activity	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032474	Argonaute_N	84	242
IPR003165	Piwi	495	811
IPR014811	ArgoL1	255	291

External Links

No external refs found!