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  5. Ehy_g05572

Ehy_g05572 (VAM3, ATVAM3,...)


Aliases : VAM3, ATVAM3, ATSYP22, SGR3, SYP22

Description : Qa-type SYP2-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0001469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g05572

Target Alias Description ECC score Gene Family Method Actions
AT5G46860 VAM3, ATVAM3,... Syntaxin/t-SNARE family protein 0.02 OrthoFinder output from all 47 species
Als_g32694 SYP21, ATSYP21,... Qa-type SYP2-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Aop_g16776 VAM3, ATVAM3,... Qa-type SYP2-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
LOC_Os01g15110.1 SYP21, ATSYP21,... SYP2-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
Ore_g25342 SYP21, ATSYP21,... Qa-type SYP2-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Tin_g02410 VAM3, ATVAM3,... Qa-type SYP2-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0051087 chaperone binding IEP HCCA
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 223 273
IPR006011 Syntaxin_N 31 129
No external refs found!