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  5. Azfi_s2407.g111239

Azfi_s2407.g111239 (TY1, TRX-Y1, ATY1)


Aliases : TY1, TRX-Y1, ATY1

Description : not classified & original description: CDS=1-519


Gene families : OG0006023 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006023_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s2407.g111239
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Aob_g03928 TY1, TRX-Y1, ATY1 Y-type thioredoxin *(Trx-Y) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0872.g090693 TY1, TRX-Y1, ATY1 Y-type thioredoxin *(Trx-Y) & original description: CDS=1-615 0.11 OrthoFinder output from all 47 species
Mp5g22220.1 TY1, TRX-Y1, ATY1 Y-type thioredoxin 0.02 OrthoFinder output from all 47 species
Pnu_g06053 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09483 No alias Y-type thioredoxin *(Trx-Y) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g09484 No alias Y-type thioredoxin *(Trx-Y) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008252 nucleotidase activity IEP HCCA
MF GO:0008253 5'-nucleotidase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0009166 nucleotide catabolic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009264 deoxyribonucleotide catabolic process IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 115 164
No external refs found!