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  5. Azfi_s2046.g108873

Azfi_s2046.g108873 (FLN1)


Aliases : FLN1

Description : cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1) & original description: CDS=177-1592


Gene families : OG0007280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s2046.g108873

Target Alias Description ECC score Gene Family Method Actions
Ala_g18551 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.03 OrthoFinder output from all 47 species
Azfi_s0098.g043926 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.16 OrthoFinder output from all 47 species
Azfi_s1527.g104148 FLN1 not classified & original description: CDS=1-1035 0.04 OrthoFinder output from all 47 species
MA_175363g0010 FLN1 Fructokinase-like 1, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Ppi_g61036 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.03 OrthoFinder output from all 47 species
Smo54157 FLN1 Fructokinase-like 1, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc09g011850.4.1 FLN1, Solyc09g011850 PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.03 OrthoFinder output from all 47 species
Zm00001e019266_P002 FLN1, Zm00001e019266 PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR011611 PfkB_dom 90 426
No external refs found!