- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : E3 ubiquitin ligase & original description: CDS=1-984
Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Azfi_s1957.g108376 | |
| Cluster | HCCA: Cluster_27 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G47550 | No alias | RING/FYVE/PHD zinc finger superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g013103 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g06569 | No alias | E3 ubiquitin ligase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g01768 | No alias | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g36108 | No alias | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.03G099300.1 | Ceric.03G099300 | E3 ubiquitin ligase & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01038141001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_09261 | No alias | RING-v-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Gb_37740 | No alias | RING-v-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g36740.1 | LOC_Os02g36740 | RING-v-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Mp8g15410.1 | No alias | RING-v-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g11851 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0002.g000908 | No alias | E3 ubiquitin ligase & original description: CDS=1-1032 | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0033.g010979 | No alias | E3 ubiquitin ligase & original description: CDS=450-1109 | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g079530.4.1 | Solyc01g079530 | RING-v-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g116030.4.1 | Solyc03g116030 | RING-v-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10556 | No alias | E3 ubiquiTin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e021220_P001 | Zm00001e021220 | RING-v-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e026209_P003 | Zm00001e026209 | RING-v-class E3 ligase | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005253 | monoatomic anion channel activity | IEP | HCCA |
| MF | GO:0005254 | chloride channel activity | IEP | HCCA |
| MF | GO:0008509 | monoatomic anion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015108 | chloride transmembrane transporter activity | IEP | HCCA |
| No external refs found! |