Ehy_g05462 (RAB2A, AT-RAB2,...)

Aliases : RAB2A, AT-RAB2, RAB-B1B, ATRAB-B1B, RABB1C, ATRABB1C, ATRAB2A

Description : B-class RAB GTPase & original description: none

Gene families : OG0001412 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001412_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ehy_g05462

Target	Alias	Description	ECC score	Gene Family Method
Adi_g013159	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g00771	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g02038	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g05462	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g39157	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001001.25	RAB2A, AT-RAB2,...	Vesicle trafficking.regulation of membrane tethering and...	0.02	OrthoFinder output from all 47 species
Dcu_g02507	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01002785001	RAB2A, AT-RAB2,...	Ras-related protein RABB1c OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Gb_15369	RAB2A, AT-RAB2,...	B-class RAB GTPase	0.03	OrthoFinder output from all 47 species
LOC_Os10g14150.1	RAB2A, AT-RAB2,...	B-class RAB GTPase	0.02	OrthoFinder output from all 47 species
Len_g20517	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g00468	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
MA_5611g0010	RAB2A, AT-RAB2,...	B-class RAB GTPase	0.02	OrthoFinder output from all 47 species
Msp_g08873	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g33803	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g34111	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g29183	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g40325	No alias	B-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g46845	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e014961_P003	RAB2A, AT-RAB2,...	B-class RAB GTPase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0003779	actin binding	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
MF	GO:0008146	sulfotransferase activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	8	168

External Links

No external refs found!

Ehy_g05462 (RAB2A, AT-RAB2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation