Description : E3 ubiquitin ligase *(RMA/MUSE) & original description: CDS=1-693
Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Azfi_s1126.g097855 | |
Cluster | HCCA: Cluster_77 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00024p00165910 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
AT4G27470 | RMA3, ATRMA3 | RING membrane-anchor 3 | 0.04 | OrthoFinder output from all 47 species | |
Aop_g16158 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.30G056300.1 | Ceric.30G056300 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
Dac_g26455 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g11588 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g44544 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e003329_P001 | Zm00001e003329 | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0046872 | metal ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
BP | GO:0006787 | porphyrin-containing compound catabolic process | IEP | HCCA |
BP | GO:0015994 | chlorophyll metabolic process | IEP | HCCA |
BP | GO:0015996 | chlorophyll catabolic process | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
BP | GO:0033015 | tetrapyrrole catabolic process | IEP | HCCA |
BP | GO:0042440 | pigment metabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
BP | GO:0046149 | pigment catabolic process | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
MF | GO:0047746 | chlorophyllase activity | IEP | HCCA |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR018957 | Znf_C3HC4_RING-type | 42 | 82 |
No external refs found! |