Solyc09g018020.3.1 (Solyc09g018020.3)


Aliases : Solyc09g018020.3

Description : 10.7 cell wall.modification Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A10 (EXPA10)


Gene families : OG_01_0000017 (Gene family) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc09g018020.3.1
Cluster HCCA cluster: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.02 Gene family
AT1G69530 ATEXPA1, EXP1,... expansin A1 0.03 Gene family
AT2G40610 EXPA8, ATHEXP... expansin A8 0.02 Gene family
AT3G29030 EXP5, ATHEXP... expansin A5 0.03 Gene family
AT4G01630 ATHEXP ALPHA... expansin A17 0.03 Gene family
AT5G39300 ATEXPA25,... expansin A25 0.02 Gene family
GSVIVT01008762001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
GSVIVT01011437001 No alias 10.7 cell wall.modification Encodes an expansin. Naming... 0.04 Gene family
GSVIVT01019965001 No alias 10.7 cell wall.modification Encodes an expansin. Naming... 0.03 Gene family
GSVIVT01024946001 No alias 10.7 cell wall.modification putative expansin. Naming... 0.03 Gene family
GSVIVT01030191001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
GSVIVT01032681001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
GSVIVT01035233001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os03g21820 Os03g0336400 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os03g25990 Os03g0377100 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os06g41700 Os06g0621900 10.7 cell wall.modification expansin -like protein.... 0.02 Gene family
MA_10299189g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_35592g0020 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Smo231226 PACid_15415243 10.7 cell wall.modification Encodes an expansin. Naming... 0.03 Gene family
Smo410512 PACid_15406346 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
Smo91129 PACid_15413212 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Solyc03g115300.2.1 Solyc03g115300.2 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Solyc05g052245.1.1 Solyc05g052245.1 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Solyc12g089380.2.1 Solyc12g089380.2 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d016022 GRMZM2G146540 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d016054 GRMZM2G359799 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Zm00001d018031 GRMZM2G105844 10.7 cell wall.modification Member of Alpha-Expansin... 0.06 Gene family
Zm00001d034663 GRMZM2G368886 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d035104 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d040247 GRMZM2G094523 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 66 153
IPR007117 Expansin_CBD 164 241
No external refs found!