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  5. AMTR_s00147p00088570

AMTR_s00147p00088570 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00147.46

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor


Gene families : OG_01_0003857 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003857_tree ,
OG_02_0002666 (LandPlants) Phylogenetic Tree(s): OG_02_0002666_tree ,
OG_03_0001483 (SeedPlants) Phylogenetic Tree(s): OG_03_0001483_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00147p00088570
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AT1G01380 ETC1 Homeodomain-like superfamily protein 0.03 Archaeplastida
AT4G01060 ETC3, CPL3 CAPRICE-like MYB3 0.05 Archaeplastida
AT5G53200 TRY Homeodomain-like superfamily protein 0.05 Archaeplastida
MA_10260690g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_962483g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
AT1G01380 ETC1 Homeodomain-like superfamily protein 0.03 LandPlants
AT4G01060 ETC3, CPL3 CAPRICE-like MYB3 0.04 LandPlants
AT5G53200 TRY Homeodomain-like superfamily protein 0.05 LandPlants
MA_10260690g0010 No alias no hits & (original description: none) 0.03 LandPlants
AT4G01060 ETC3, CPL3 CAPRICE-like MYB3 0.02 SeedPlants
AT5G53200 TRY Homeodomain-like superfamily protein 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 29 70
No external refs found!