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  5. Azfi_s0863.g090086

Azfi_s0863.g090086


Description : not classified & original description: CDS=1-234


Gene families : OG0007957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007957_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0863.g090086
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0357.g066802 No alias not classified & original description: CDS=1-234 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 175 222
IPR002885 Pentatricopeptide_repeat 277 324
IPR002885 Pentatricopeptide_repeat 74 122
IPR002885 Pentatricopeptide_repeat 250 271
IPR002885 Pentatricopeptide_repeat 351 373
IPR002885 Pentatricopeptide_repeat 49 72
No external refs found!