Ehy_g05098 (ISE2, PDE317, EMB25)

Aliases : ISE2, PDE317, EMB25

Description : group-II intron splicing RNA helicase *(ISE2) & original description: none

Gene families : OG0004771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004771_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ehy_g05098

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00090p00178540	ISE2, PDE317,...	RNA processing.organelle machineries.RNA...	0.03	OrthoFinder output from all 47 species
AT1G70070	ISE2, PDE317, EMB25	DEAD/DEAH box helicase, putative	0.03	OrthoFinder output from all 47 species
Ala_g22694	ISE2, PDE317, EMB25	group-II intron splicing RNA helicase *(ISE2) & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0003.g007647	ISE2, PDE317, EMB25	group-II intron splicing RNA helicase *(ISE2) & original...	0.07	OrthoFinder output from all 47 species
LOC_Os02g50560.1	ISE2, PDE317,...	RNA helicase (ISE2)	0.03	OrthoFinder output from all 47 species
Mp4g01470.1	ISE2, PDE317, EMB25	RNA helicase (ISE2)	0.02	OrthoFinder output from all 47 species
Ore_g19053	ISE2, PDE317, EMB25	group-II intron splicing RNA helicase *(ISE2) & original...	0.02	OrthoFinder output from all 47 species
Spa_g26560	ISE2, PDE317, EMB25	group-II intron splicing RNA helicase *(ISE2) & original...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR012961	Ski2/MTR4_C	934	1099
IPR011545	DEAD/DEAH_box_helicase_dom	79	231

External Links

No external refs found!