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  5. Azfi_s0754.g085337

Azfi_s0754.g085337


Description : not classified & original description: CDS=1-1965


Gene families : OG0000102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0754.g085337

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00063470 CHR01, CHR1,... Chromatin organisation.DNA methylation.RNA-independent... 0.05 OrthoFinder output from all 47 species
AMTR_s00086p00165640 PKL, GYM, CHR6,... Chromatin organisation.chromatin remodeling... 0.02 OrthoFinder output from all 47 species
AMTR_s00090p00148990 SYD, CHR3,... Chromatin organisation.chromatin remodeling... 0.02 OrthoFinder output from all 47 species
AT2G25170 PKL, GYM, CHR6,... chromatin remodeling factor CHD3 (PICKLE) 0.05 OrthoFinder output from all 47 species
AT2G28290 SYD, CHR3 P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT4G31900 PKR2 chromatin remodeling factor, putative 0.03 OrthoFinder output from all 47 species
AT5G66750 CHR01, CHR1,... chromatin remodeling 1 0.04 OrthoFinder output from all 47 species
Adi_g011533 ATCHR12 SMARCA component *(SYD/BRM/MINU) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g011986 CHR5 component *(CHR5) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Adi_g061147 PKL, GYM, CHR6,... CHD3-type chromatin remodeling factor *(PKL/PKR) &... 0.03 OrthoFinder output from all 47 species
Aev_g04898 SYD, CHR3 SMARCA component *(SYD/BRM/MINU) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g26211 No alias chromatin remodeling factor *(ALC1) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11507 PKL, GYM, CHR6,... CHD3-type chromatin remodeling factor *(PKL/PKR) &... 0.03 OrthoFinder output from all 47 species
Ala_g12634 PKL, GYM, CHR6,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22712 CHR11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27421 SYD, CHR3 SMARCA component *(SYD/BRM/MINU) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28495 CHR01, CHR1,... chromatin remodeling factor *(DDM1) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g01913 CHR01, CHR1,... chromatin remodeling factor *(DDM1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03868 CHR11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14847 CHR5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22693 CHR17 ATPase component *(CHR11/CHR17) of ISWI chromatin... 0.03 OrthoFinder output from all 47 species
Als_g59182 PKR1, CHR4 CHD3-type chromatin remodeling factor *(PKL/PKR) &... 0.03 OrthoFinder output from all 47 species
Aop_g05226 CHR5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06161 CHR01, CHR1,... chromatin remodeling factor *(DDM1) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08885 CHR01, CHR1,... chromatin remodeling factor *(DDM1) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g13768 PKL, GYM, CHR6,... CHD3-type chromatin remodeling factor *(PKL/PKR) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene24029.t1 CHR5, Aspi01Gene24029 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G040400.1 CHR5, Ceric.02G040400 not classified & original description: pacid=50584074... 0.11 OrthoFinder output from all 47 species
Ceric.10G020300.1 CHR5, Ceric.10G020300 component *(CHR5) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Ceric.21G025000.1 CHR11, Ceric.21G025000 ATPase component *(CHR11/CHR17) of ISWI chromatin... 0.04 OrthoFinder output from all 47 species
Ceric.36G015700.1 PKL, GYM, CHR6,... CHD3-type chromatin remodeling factor *(PKL/PKR) &... 0.05 OrthoFinder output from all 47 species
Ceric.37G008600.1 SYD, CHR3,... SMARCA component *(SYD/BRM/MINU) & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000217.25 SYD, CHR3 Chromatin structure-remodeling complex protein SYD... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000350.9 PKR2 CHD3-type chromatin-remodeling factor PICKLE... 0.03 OrthoFinder output from all 47 species
Cre03.g158550 PKL, GYM, CHR6,... CHD3-type chromatin-remodeling factor PICKLE... 0.04 OrthoFinder output from all 47 species
Cre09.g390000 CHR17 RNA biosynthesis.transcriptional activation.PHD finger... 0.02 OrthoFinder output from all 47 species
Cre16.g647602 CHR01, CHR1,... ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dac_g05131 CHR01, CHR1,... chromatin remodeling factor *(DDM1) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g07364 CHR01, CHR1,... chromatin remodeling factor *(DDM1) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g05806 CHR11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42061 CHR5 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g09827 SYD, CHR3 SMARCA component *(SYD/BRM/MINU) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10991 PKR1, CHR4 CHD3-type chromatin remodeling factor *(PKL/PKR) &... 0.07 OrthoFinder output from all 47 species
GSVIVT01018218001 No alias Chromatin organisation.chromatin remodeling... 0.03 OrthoFinder output from all 47 species
GSVIVT01018979001 CHR01, CHR1,... ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
GSVIVT01035901001 PKL, GYM, CHR6,... Chromatin organisation.chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Gb_16888 CHR01, CHR1,... ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Gb_16961 PKR1, CHR4 chromatin remodeling factor (Chd3/Mi-2) 0.05 OrthoFinder output from all 47 species
LOC_Os09g27060.1 CHR01, CHR1,... chromatin remodeling factor (DDM1) 0.05 OrthoFinder output from all 47 species
Len_g14805 CHR5 not classified & original description: none 0.09 OrthoFinder output from all 47 species
MA_102992g0020 CHR11 Probable chromatin-remodeling complex ATPase chain... 0.03 OrthoFinder output from all 47 species
MA_104034g0010 CHR01, CHR1,... chromatin remodeling factor (DDM1) 0.08 OrthoFinder output from all 47 species
MA_10430012g0010 PKL, GYM, CHR6,... CHD3-type chromatin-remodeling factor PICKLE... 0.03 OrthoFinder output from all 47 species
MA_127544g0010 PKL, GYM, CHR6,... CHD3-type chromatin-remodeling factor PICKLE... 0.07 OrthoFinder output from all 47 species
MA_141135g0010 PKL, GYM, CHR6,... CHD3-type chromatin-remodeling factor PICKLE... 0.03 OrthoFinder output from all 47 species
MA_42406g0010 CHR01, CHR1,... chromatin remodeling factor (DDM1) 0.04 OrthoFinder output from all 47 species
Mp1g18560.1 PKL, GYM, CHR6,... CHD3-type chromatin-remodeling factor PICKLE... 0.03 OrthoFinder output from all 47 species
Mp4g12200.1 CHR01, CHR1,... chromatin remodeling factor (DDM1) 0.06 OrthoFinder output from all 47 species
Mp5g24460.1 PKL, GYM, CHR6,... chromatin remodeling factor (Chd3/Mi-2) 0.02 OrthoFinder output from all 47 species
Nbi_g02499 CHR5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04407 CHR01, CHR1,... chromatin remodeling factor *(DDM1) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29874 CHR5 component *(CHR5) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Pir_g16211 SYD, CHR3 SMARCA component *(SYD/BRM/MINU) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12699 CHR01, CHR1,... chromatin remodeling factor *(DDM1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17278 No alias chromatin remodeling factor *(DDM1) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g32237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo102612 CHR5 Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo155996 PKL, GYM, CHR6,... Chromatin organisation.chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Solyc02g062780.4.1 CHR01, CHR1,... chromatin remodeling factor (DDM1) 0.05 OrthoFinder output from all 47 species
Solyc02g085390.4.1 CHR01, CHR1,... chromatin remodeling factor (DDM1) 0.03 OrthoFinder output from all 47 species
Solyc06g054560.3.1 CHR11, Solyc06g054560 chromatin remodeling factor (Iswi) 0.08 OrthoFinder output from all 47 species
Solyc06g065730.3.1 PKL, GYM, CHR6,... chromatin remodeling factor (Chd3/Mi-2) 0.02 OrthoFinder output from all 47 species
Solyc08g029130.3.1 PKL, GYM, CHR6,... chromatin remodeling factor (Chd3/Mi-2) 0.03 OrthoFinder output from all 47 species
Spa_g13795 CHR01, CHR1,... chromatin remodeling factor *(DDM1) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g05645 CHR17 ATPase component *(CHR11/CHR17) of ISWI chromaTin... 0.04 OrthoFinder output from all 47 species
Tin_g08903 CHR01, CHR1,... chromaTin remodeling factor *(DDM1) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g31900 CHR5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e005517_P002 CHR01, CHR1,... chromatin remodeling factor (DDM1) 0.05 OrthoFinder output from all 47 species
Zm00001e010722_P005 ATCHR12, Zm00001e010722 Probable ATP-dependent DNA helicase CHR12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e011541_P001 CHR01, CHR1,... chromatin remodeling factor (DDM1) 0.06 OrthoFinder output from all 47 species
Zm00001e017643_P001 CHR17, Zm00001e017643 chromatin remodeling factor (Iswi) 0.06 OrthoFinder output from all 47 species
Zm00001e030969_P003 SYD, CHR3, Zm00001e030969 chromatin remodeling factor (Snf2) 0.03 OrthoFinder output from all 47 species
Zm00001e040406_P002 ATCHR12, Zm00001e040406 chromatin remodeling factor (Snf2) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR023780 Chromo_domain 531 579
No external refs found!