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  5. Azfi_s0725.g083826

Azfi_s0725.g083826


Description : RNA editing factor *(OZ) & original description: CDS=182-2308


Gene families : OG0001673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0725.g083826
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Adi_g108029 No alias RNA editing factor *(OZ) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g50430.1 LOC_Os03g50430 RNA editing factor (OZ-type) 0.03 OrthoFinder output from all 47 species
MA_10436123g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_7499122g0010 No alias RNA editing factor (OZ-type) 0.04 OrthoFinder output from all 47 species
Pir_g15553 No alias RNA editing factor *(OZ) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001876 Znf_RanBP2 521 545
IPR001876 Znf_RanBP2 594 616
IPR001876 Znf_RanBP2 554 580
No external refs found!