Azfi_s0708.g082858 (ABI3, SIS10)

Aliases : ABI3, SIS10

Description : LAV-ABI3-type transcription factor & original description: CDS=1-2334

Gene families : OG0001487 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001487_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0708.g082858
Cluster	HCCA: Cluster_95

Target	Alias	Description	ECC score	Gene Family Method
AT3G24650	ABI3, SIS10	AP2/B3-like transcriptional factor family protein	0.03	OrthoFinder output from all 47 species
AT3G26790	FUS3	AP2/B3-like transcriptional factor family protein	0.03	OrthoFinder output from all 47 species
GSVIVT01033007001	FUS3	RNA biosynthesis.transcriptional activation.B3...	0.03	OrthoFinder output from all 47 species
Pnu_g26812	ABI3, SIS10	transcription factor *(ABI3) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	584	679

External Links

No external refs found!