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  5. Azfi_s0700.g082613

Azfi_s0700.g082613


Description : component *(bL34c) of large plastid ribosomal-subunit proteome & original description: CDS=124-528


Gene families : OG0007282 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007282_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0700.g082613
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00119000 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.06 OrthoFinder output from all 47 species
AT1G29070 No alias Ribosomal protein L34 0.15 OrthoFinder output from all 47 species
Aev_g01858 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Als_g07958 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cba_g01552 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.11G081600.1 Ceric.11G081600 component *(bL34c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Cre01.g030050 No alias Protein biosynthesis.organelle translation... 0.09 OrthoFinder output from all 47 species
GSVIVT01021193001 No alias Protein biosynthesis.organelle translation... 0.11 OrthoFinder output from all 47 species
Gb_28936 No alias component psRPL34 of large ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
LOC_Os01g59060.1 LOC_Os01g59060 component psRPL34 of large ribosomal subunit proteome 0.14 OrthoFinder output from all 47 species
Len_g11773 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Lfl_g00226 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
MA_10435644g0010 No alias component psRPL34 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Mp1g06530.1 No alias component psRPL34 of large ribosomal subunit proteome 0.16 OrthoFinder output from all 47 species
Msp_g30766 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ore_g14577 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pnu_g06994 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Pp3c18_19220V3.1 Pp3c18_19220 Ribosomal protein L34 0.04 OrthoFinder output from all 47 species
Pp3c21_6450V3.1 Pp3c21_6450 Ribosomal protein L34 0.01 OrthoFinder output from all 47 species
Ppi_g61745 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010804 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Sam_g04499 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Solyc01g056780.3.1 Solyc01g056780 component psRPL34 of large ribosomal subunit proteome 0.15 OrthoFinder output from all 47 species
Spa_g04308 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Spa_g14614 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Zm00001e019534_P001 Zm00001e019534 component psRPL34 of large ribosomal subunit proteome 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003873 6-phosphofructo-2-kinase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006000 fructose metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!