Azfi_s0680.g082009 (PBA1)

Aliases : PBA1

Description : beta-type-1 component *(PBA) of 26S proteasome & original description: CDS=89-997

Gene families : OG0003808 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003808_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0680.g082009

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00001098.5	PBA1	Protein degradation.26S proteasome.20S core...	0.02	OrthoFinder output from all 47 species
Cre06.g279000	PBA1	Protein degradation.26S proteasome.20S core...	0.03	OrthoFinder output from all 47 species
Cre12.g531100	PBA1	Protein degradation.26S proteasome.20S core...	0.02	OrthoFinder output from all 47 species
Dac_g01306	PBA1	beta-type-1 component *(PBA) of 26S proteasome &...	0.04	OrthoFinder output from all 47 species
GSVIVT01032253001	PBA1	Protein degradation.26S proteasome.20S core...	0.03	OrthoFinder output from all 47 species
GSVIVT01035567001	PBA1	Protein degradation.26S proteasome.20S core...	0.03	OrthoFinder output from all 47 species
Mp6g09980.1	PBA1	component beta type-1 of 26S proteasome	0.03	OrthoFinder output from all 47 species
Ppi_g41753	PBA1	beta-type-1 component *(PBA) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Spa_g18519	PBA1	beta-type-1 component *(PBA) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Zm00001e029965_P002	PBA1, Zm00001e029965	component beta type-1 of 26S proteasome	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	94	250

External Links

No external refs found!