Aliases : PNH, AGO10, ZLL
Description : not classified & original description: none
Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00058p00069070 | AGO7, ZIP,... | Chromatin organisation.DNA methylation.canonical... | 0.04 | OrthoFinder output from all 47 species | |
Adi_g113326 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.02 | OrthoFinder output from all 47 species | |
Als_g58865 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g11029 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g16425 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g29067 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g42950 | AGO1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g18764 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.03 | OrthoFinder output from all 47 species | |
Gb_34718 | PNH, AGO10, ZLL | Protein argonaute 10 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g58490.1 | AGO1, LOC_Os02g58490 | RIS-Complex miRNA recruiting factor (AGO1) | 0.02 | OrthoFinder output from all 47 species | |
Len_g05459 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.02 | OrthoFinder output from all 47 species | |
Len_g23067 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.02 | OrthoFinder output from all 47 species | |
MA_118377g0010 | AGO1 | RIS-Complex miRNA recruiting factor (AGO1) | 0.04 | OrthoFinder output from all 47 species | |
MA_71066g0010 | AGO4, OCP11 | Protein argonaute 4B OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g14613 | AGO4, OCP11 | siRNA-integrating factor *(AGO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo446086 | AGO1 | Chromatin organisation.DNA methylation.canonical... | 0.01 | OrthoFinder output from all 47 species | |
Solyc03g098280.4.1 | AGO1, Solyc03g098280 | RIS-Complex miRNA recruiting factor (AGO1) | 0.03 | OrthoFinder output from all 47 species | |
Spa_g09278 | AGO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g12263 | AGO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g30415 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g51306 | AGO1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Tin_g39101 | AGO1 | regulatory protein *(AGO7) of transacTing siRNA pathway... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003724 | RNA helicase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004527 | exonuclease activity | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
MF | GO:0008186 | ATP-dependent activity, acting on RNA | IEP | HCCA |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
No external refs found! |