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  5. Azfi_s0641.g080692

Azfi_s0641.g080692


Description : not classified & original description: CDS=1-1947


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0641.g080692

Target Alias Description ECC score Gene Family Method Actions
Adi_g003175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003802 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021159 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55921.t1 OTP82, Aspi01Gene55921 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0108.g045187 No alias not classified & original description: CDS=1-2178 0.1 OrthoFinder output from all 47 species
Azfi_s1562.g104338 OTP84 not classified & original description: CDS=59-2905 0.08 OrthoFinder output from all 47 species
Ceric.15G050700.1 Ceric.15G050700 not classified & original description: pacid=50639527... 0.03 OrthoFinder output from all 47 species
Ore_g36349 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01673 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14870 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53382 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g12533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16320 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11567 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g22574 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22905 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g29657 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e003605_P001 DOT4, Zm00001e003605 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
Zm00001e007042_P001 Zm00001e007042 RNA editing factor (AEF1) 0.03 OrthoFinder output from all 47 species
Zm00001e011467_P004 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR046848 E_motif 592 642
IPR002885 Pentatricopeptide_repeat 170 218
IPR002885 Pentatricopeptide_repeat 374 421
IPR002885 Pentatricopeptide_repeat 499 558
IPR002885 Pentatricopeptide_repeat 274 302
IPR002885 Pentatricopeptide_repeat 72 101
IPR002885 Pentatricopeptide_repeat 246 273
No external refs found!