Azfi_s0637.g080498 (KNAT4)


Aliases : KNAT4

Description : KNOX-type transcription factor & original description: CDS=1-810


Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0637.g080498
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00178300 KNAT7, IXR11,... Homeobox protein HD1 OS=Brassica napus 0.08 OrthoFinder output from all 47 species
AT5G25220 KNAT3 KNOTTED1-like homeobox gene 3 0.08 OrthoFinder output from all 47 species
Adi_g060986 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04111 KNAT4 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15588 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g22220 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.15G063000.1 KNAT4, Ceric.15G063000 KNOX-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
GSVIVT01009273001 BP, BP1, KNAT1 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
Lfl_g06541 BP, BP1, KNAT1 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30292 KNAT6, KNAT6L, KNAT6S not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25497 KNAT4 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35975 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36039 KNAT4 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06826 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c18_18750V3.1 Pp3c18_18750 KNOTTED1-like homeobox gene 6 0.01 OrthoFinder output from all 47 species
Pp3c19_5610V3.1 Pp3c19_5610 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c19_5620V3.1 BP, BP1, KNAT1,... KNOTTED-like from Arabidopsis thaliana 2 0.01 OrthoFinder output from all 47 species
Pp3c21_10320V3.1 BUM1, SHL, STM,... KNOTTED-like from Arabidopsis thaliana 2 0.02 OrthoFinder output from all 47 species
Ppi_g10499 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0115.g020964 BUM1, SHL, STM,... KNOX-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0250.g026749 KNAT3 not classified & original description: CDS=1-780 0.05 OrthoFinder output from all 47 species
Sam_g36645 No alias KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g100510.4.1 KNAT6, KNAT6L,... transcription factor (KNOX) 0.04 OrthoFinder output from all 47 species
Solyc02g081120.4.1 BUM1, SHL, STM,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
Zm00001e027562_P001 KNAT6, KNAT6L,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004797 thymidine kinase activity IEP HCCA
MF GO:0019136 deoxynucleoside kinase activity IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019206 nucleoside kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR005540 KNOX1 60 81
IPR008422 Homeobox_KN_domain 213 252
No external refs found!