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  5. Ehy_g04992

Ehy_g04992 (APUM23, PUM23)


Aliases : APUM23, PUM23

Description : rRNA biogenesis auxiliary factor *(APUM23) & original description: none


Gene families : OG0006067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g04992

Target Alias Description ECC score Gene Family Method Actions
Solyc03g123640.3.1 APUM23, PUM23,... APUM23 rRNA biogenesis auxiliary factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 528 561
IPR001313 Pumilio_RNA-bd_rpt 170 190
IPR001313 Pumilio_RNA-bd_rpt 346 380
No external refs found!