1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0608.g079154

Azfi_s0608.g079154


Description : not classified & original description: CDS=135-584


Gene families : OG0001089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001089_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0608.g079154

Target Alias Description ECC score Gene Family Method Actions
AT1G07350 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 OrthoFinder output from all 47 species
Ala_g08659 No alias splicing factor *(SR45a) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G085700.1 Ceric.05G085700 splicing factor *(SR45a) & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.146 No alias Serine/arginine-rich splicing factor SR45a... 0.02 OrthoFinder output from all 47 species
Gb_20180 No alias Serine/arginine-rich splicing factor SR45a... 0.03 OrthoFinder output from all 47 species
LOC_Os03g15890.1 LOC_Os03g15890 Serine/arginine-rich splicing factor SR45a... 0.01 OrthoFinder output from all 47 species
Ore_g42687 No alias splicing factor *(SR45a) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005358 No alias splicing factor *(SR45a) & original description: CDS=1-864 0.03 OrthoFinder output from all 47 species
Smo80254 No alias Serine/arginine-rich splicing factor SR45a... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!