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  5. Azfi_s0591.g078731

Azfi_s0591.g078731


Description : not classified & original description: CDS=293-1048


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0591.g078731
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AT5G38070 No alias RING/FYVE/PHD zinc finger superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g09880 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04464 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41197.t1 Aspi01Gene41197 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47819.t1 Aspi01Gene47819 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G021200.1 Ceric.23G021200 E3 ubiquitin ligase & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g17057 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g28730.1 LOC_Os05g28730 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Len_g08617 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59358 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g15410.1 No alias RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Nbi_g09753 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10613 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01567 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g010979 No alias E3 ubiquitin ligase & original description: CDS=450-1109 0.04 OrthoFinder output from all 47 species
Solyc03g116030.4.1 Solyc03g116030 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc04g007600.4.1 Solyc04g007600 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e026209_P003 Zm00001e026209 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e028572_P001 Zm00001e028572 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 60 84
No external refs found!