Solyc09g010830.3.1 (Solyc09g010830.3)


Aliases : Solyc09g010830.3

Description : 29.5.11 protein.degradation.ubiquitin Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE). Arabidopsis


Gene families : OG_01_0003388 (Gene family) Phylogenetic Tree(s): OG0003388_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc09g010830.3.1
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT5G02310 PRT6 proteolysis 6 0.03 Gene family
GSVIVT01034169001 No alias 29.5.11 protein.degradation.ubiquitin Encodes... 0.04 Gene family
LOC_Os01g05500 Os01g0148000,... 29.5.11 protein.degradation.ubiquitin Encodes... 0.03 Gene family
MA_10429079g0010 No alias 29.5.11 protein.degradation.ubiquitin Encodes... 0.02 Gene family
MA_10429118g0010 No alias 29.5.11 protein.degradation.ubiquitin Encodes... 0.04 Gene family
Smo438209 PACid_15419516 29.5.11 protein.degradation.ubiquitin Encodes... 0.01 Gene family
Zm00001d039860 GRMZM2G438938,... 29.5.11 protein.degradation.ubiquitin Encodes... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003126 Znf_UBR 122 188
No external refs found!