Aliases : PUB12, AtPUB12
Description : not classified & original description: CDS=1-549
Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00063p00200790 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 11 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
AT3G01400 | No alias | ARM repeat superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
Adi_g010019 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g04835 | PUB13, ATPUB13 | E3 ubiquitin ligase *(PUB15) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g09883 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g50065 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g01345 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene31832.t1 | PUB13, ATPUB13,... | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene37780.t1 | PUB13, ATPUB13,... | E3 ubiquitin ligase *(PUB15) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.07G010000.1 | PUB13, ATPUB13,... | E3 ubiquitin ligase & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.35G034600.1 | PUB18, ATPUB18,... | not classified & original description: pacid=50581001... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g13358 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g18762 | No alias | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01009347001 | No alias | U-box domain-containing protein 4 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01016225001 | PUB14, ATPUB14 | U-box domain-containing protein 14 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01020229001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g01304.1 | PUB14, ATPUB14,... | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g04470.1 | PUB8, B80, LOC_Os08g04470 | U-box domain-containing protein 8 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os12g38210.1 | PUB13, ATPUB13,... | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
MA_10426688g0010 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g09964 | PUB18, ATPUB18 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g33829 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g06418 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g07455 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g14332 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0066.g016119 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: CDS=1314-3077 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g25175 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g072080.1.1 | ATPUB17, PUB17,... | U-box domain-containing protein 17 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Solyc04g077850.3.1 | Solyc04g077850 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Solyc12g088360.2.1 | Solyc12g088360 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e002954_P001 | PUB13, ATPUB13,... | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004486 | methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity | IEP | HCCA |
MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | HCCA |
CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | HCCA |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
MF | GO:0051087 | chaperone binding | IEP | HCCA |
No external refs found! |