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  5. Azfi_s0463.g072344

Azfi_s0463.g072344 (FLA10)


Aliases : FLA10

Description : regulatory factor SOS5 of SOS *(Salt Overly Sensitive) signalling pathway & original description: CDS=1-1449


Gene families : OG0000786 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000786_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0463.g072344
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT2G45470 AGP8, FLA8 FASCICLIN-like arabinogalactan protein 8 0.03 OrthoFinder output from all 47 species
Aspi01Gene57863.t1 AGP8, FLA8,... Fasciclin-type arabinogalactan protein & original... 0.03 OrthoFinder output from all 47 species
Dcu_g04604 AGP8, FLA8 regulatory factor SOS5 of SOS *(Salt Overly Sensitive)... 0.04 OrthoFinder output from all 47 species
Nbi_g13163 AGP8, FLA8 regulatory factor SOS5 of SOS *(Salt Overly Sensitive)... 0.03 OrthoFinder output from all 47 species
Solyc10g005960.1.1 FLA1, Solyc10g005960 fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Spa_g50837 FLA10 Fasciclin-type arabinogalactan protein & original... 0.03 OrthoFinder output from all 47 species
Zm00001e019325_P001 SOS5, Zm00001e019325 fasciclin-type arabinogalactan protein. regulatory... 0.02 OrthoFinder output from all 47 species
Zm00001e036843_P001 FLA2, Zm00001e036843 fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0031491 nucleosome binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR000782 FAS1_domain 225 362
IPR000782 FAS1_domain 53 134
No external refs found!