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  5. Ehy_g04837

Ehy_g04837


Description : not classified & original description: none


Gene families : OG0000898 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000898_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g04837

Target Alias Description ECC score Gene Family Method Actions
Adi_g058470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06029 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19277 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g21098 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.23G038800.1 Ceric.23G038800 not classified & original description: pacid=50609666... 0.03 OrthoFinder output from all 47 species
Ceric.37G013900.1 Ceric.37G013900 not classified & original description: pacid=50615693... 0.03 OrthoFinder output from all 47 species
Dac_g11372 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g13939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15209 FRL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001527001 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_09729 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_24860 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_32064 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g40270.1 LOC_Os07g40270 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g17270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g02468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g00670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04962 FRL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19044 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g21009 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25145 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g25233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27171 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33978 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g27466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13765 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g09351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12674 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g15398 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e033632_P002 Zm00001e033632 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR012474 Frigida 142 428
No external refs found!