Azfi_s0460.g072062


Description : hydroxy-tetrahydrodihydrodipicolinate reductase & original description: CDS=71-1087


Gene families : OG0006077 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006077_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0460.g072062

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00104940 evm_27.TU.AmTr_v1... Amino acid metabolism.biosynthesis.aspartate... 0.03 OrthoFinder output from all 47 species
AT2G44040 No alias Dihydrodipicolinate reductase, bacterial/plant 0.05 OrthoFinder output from all 47 species
Adi_g115530 No alias hydroxy-tetrahydrodihydrodipicolinate reductase &... 0.02 OrthoFinder output from all 47 species
Als_g21853 No alias hydroxy-tetrahydrodihydrodipicolinate reductase &... 0.04 OrthoFinder output from all 47 species
Dcu_g00976 No alias hydroxy-tetrahydrodihydrodipicolinate reductase &... 0.05 OrthoFinder output from all 47 species
Dde_g02733 No alias hydroxy-tetrahydrodihydrodipicolinate reductase &... 0.03 OrthoFinder output from all 47 species
Smo168311 No alias Amino acid metabolism.biosynthesis.aspartate... 0.02 OrthoFinder output from all 47 species
Solyc01g098380.4.1 Solyc01g098380 hydroxy-tetrahydrodihydrodipicolinate reductase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEA Interproscan
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0031179 peptide modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0070037 rRNA (pseudouridine) methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000846 DapB_N 65 188
IPR022663 DapB_C 192 332
No external refs found!