Aliases : APUM12, PUM12
Description : not classified & original description: none
Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ehy_g04830 | |
Cluster | HCCA: Cluster_49 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g008180 | APUM12, PUM12 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g17880 | APUM12, PUM12 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0090.g042709 | APUM12, PUM12 | not classified & original description: CDS=250-2769 | 0.03 | OrthoFinder output from all 47 species | |
Dac_g02900 | APUM12, PUM12 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Gb_41364 | APUM12, PUM12 | Pumilio homolog 12 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g03517 | APUM12, PUM12 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0016151 | nickel cation binding | IEP | HCCA |
BP | GO:0019627 | urea metabolic process | IEP | HCCA |
MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | HCCA |
BP | GO:0043419 | urea catabolic process | IEP | HCCA |
BP | GO:0043605 | amide catabolic process | IEP | HCCA |
BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
BP | GO:0071941 | nitrogen cycle metabolic process | IEP | HCCA |
MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | HCCA |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001313 | Pumilio_RNA-bd_rpt | 500 | 514 |
IPR001313 | Pumilio_RNA-bd_rpt | 351 | 379 |
IPR001313 | Pumilio_RNA-bd_rpt | 277 | 308 |
IPR001313 | Pumilio_RNA-bd_rpt | 241 | 273 |
IPR001313 | Pumilio_RNA-bd_rpt | 462 | 491 |
IPR001313 | Pumilio_RNA-bd_rpt | 313 | 345 |
IPR001313 | Pumilio_RNA-bd_rpt | 422 | 440 |
IPR001313 | Pumilio_RNA-bd_rpt | 386 | 419 |
No external refs found! |