Ehy_g04830 (APUM12, PUM12)


Aliases : APUM12, PUM12

Description : not classified & original description: none


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g04830
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Adi_g008180 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17880 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042709 APUM12, PUM12 not classified & original description: CDS=250-2769 0.03 OrthoFinder output from all 47 species
Dac_g02900 APUM12, PUM12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_41364 APUM12, PUM12 Pumilio homolog 12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g03517 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0016151 nickel cation binding IEP HCCA
BP GO:0019627 urea metabolic process IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0043419 urea catabolic process IEP HCCA
BP GO:0043605 amide catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0071941 nitrogen cycle metabolic process IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 500 514
IPR001313 Pumilio_RNA-bd_rpt 351 379
IPR001313 Pumilio_RNA-bd_rpt 277 308
IPR001313 Pumilio_RNA-bd_rpt 241 273
IPR001313 Pumilio_RNA-bd_rpt 462 491
IPR001313 Pumilio_RNA-bd_rpt 313 345
IPR001313 Pumilio_RNA-bd_rpt 422 440
IPR001313 Pumilio_RNA-bd_rpt 386 419
No external refs found!