Aliases : ATL43
Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: CDS=1-1827
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00203540 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00049p00223430 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00152p00054630 | RHA2A,... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
AT1G04360 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT1G49200 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT3G03550 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT4G09100 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT4G10160 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT4G24015 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT5G17600 | No alias | RING/U-box superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
Adi_g012488 | RHA3A | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g060420 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Als_g10161 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g04240 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g21036 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aspi01Gene11303.t1 | ATL5, Aspi01Gene11303 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene20771.t1 | Aspi01Gene20771 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene37450.t1 | Aspi01Gene37450 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene46831.t1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene48333.t1 | RHA3A, Aspi01Gene48333 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.05G094800.1 | ATL4H, Ceric.05G094800 | not classified & original description: pacid=50578003... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.20G013600.1 | ATL5, Ceric.20G013600 | not classified & original description: pacid=50566012... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.21G071800.1 | Ceric.21G071800 | not classified & original description: pacid=50603516... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.36G050500.1 | BRH1, Ceric.36G050500 | not classified & original description: pacid=50569096... | 0.07 | OrthoFinder output from all 47 species | |
Ceric.39G005300.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001155.20 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Cre11.g476250 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Gb_02533 | ATL2, TL2 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
Gb_36232 | No alias | IDF1 iron uptake IRT1-ubiquitin ligase | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g57460.1 | LOC_Os02g57460 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os03g05560.1 | LOC_Os03g05560 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g16970.1 | LOC_Os04g16970 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g08820.1 | LOC_Os06g08820 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g11450.1 | ATL31, CNI1,... | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os06g12680.1 | LOC_Os06g12680 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os11g05300.1 | LOC_Os11g05300 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os12g40460.1 | LOC_Os12g40460 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
Len_g57067 | ATL4H | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g39385 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_111727g0010 | No alias | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
MA_114175g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
MA_6475030g0010 | ATL3 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
MA_7553g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
MA_98187g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Msp_g00957 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g02852 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g04641 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g24535 | ATL8 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g10560 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g61044 | RHA3A | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0099.g019562 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0146.g023101 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g34706 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g123680.1.1 | Solyc03g123680 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g074820.3.1 | Solyc04g074820 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
Solyc09g066300.3.1 | Solyc09g066300 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
Spa_g15796 | RHA3B | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g56586 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g09732 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e014832_P001 | Zm00001e014832 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e021729_P001 | RHA3B, Zm00001e021729 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e023585_P001 | Zm00001e023585 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e030102_P001 | Zm00001e030102 | RING-H2-class E3 ligase | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e034025_P001 | RHA3A, Zm00001e034025 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0009055 | electron transfer activity | IEP | HCCA |
CC | GO:0016459 | myosin complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 199 | 242 |
No external refs found! |