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  5. Azfi_s0420.g069157

Azfi_s0420.g069157


Description : FSD2-interacting component of plastid-encoded RNA polymerase & original description: CDS=24-1268


Gene families : OG0005190 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0420.g069157

Target Alias Description ECC score Gene Family Method Actions
AT5G48470 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.06 OrthoFinder output from all 47 species
Aop_g20649 No alias FSD2-interacting component of plastid-encoded RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01006226001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.07 OrthoFinder output from all 47 species
Mp4g06930.1 No alias FSD2-interacting component of plastid-encoded RNA polymerase 0.05 OrthoFinder output from all 47 species
Ore_g03758 No alias FSD2-interacting component of plastid-encoded RNA... 0.06 OrthoFinder output from all 47 species
Sam_g15326 No alias FSD2-interacting component of plastid-encoded RNA... 0.03 OrthoFinder output from all 47 species
Smo74502 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 OrthoFinder output from all 47 species
Zm00001e021412_P001 Zm00001e021412 FSD2-interacting component of plastid-encoded RNA polymerase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0004655 porphobilinogen synthase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!