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  5. Azfi_s0402.g068317

Azfi_s0402.g068317 (SYP32, ATSYP32)


Aliases : SYP32, ATSYP32

Description : Qa-type SYP3-group component of SNARE membrane fusion complex & original description: CDS=122-1249


Gene families : OG0002044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002044_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0402.g068317
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000073.39 SYP32, ATSYP32 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
Cre16.g692050 SYP32, ATSYP32 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
GSVIVT01032856001 ATSED5, SED5,... Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
GSVIVT01035729001 SYP32, ATSYP32 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Sam_g17884 No alias Qa-type SYP3-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Spa_g04949 ATSED5, SED5,... Qa-type SYP3-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Zm00001e025913_P001 SYP32, ATSYP32,... SYP3-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 321 371
IPR021538 Syntaxin-5_N 1 19
No external refs found!