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  5. Azfi_s0388.g067595

Azfi_s0388.g067595


Description : component *(ARPF2) of ARPF2-ARRS1 complex & original description: CDS=118-1059


Gene families : OG0006885 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006885_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0388.g067595

Target Alias Description ECC score Gene Family Method Actions
AT3G23620 No alias Ribosomal RNA processing Brix domain protein 0.07 OrthoFinder output from all 47 species
Cba_g07304 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G026800.1 Ceric.01G026800 component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001003.36 No alias Ribosome production factor 2 homolog OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre03.g197000 No alias Ribosome production factor 2 homolog OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Dcu_g02531 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.03 OrthoFinder output from all 47 species
Ehy_g06742 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.03 OrthoFinder output from all 47 species
Gb_27395 No alias component ARPF2 of ARPF2-ARRS1 complex 0.04 OrthoFinder output from all 47 species
LOC_Os01g33030.1 LOC_Os01g33030 component ARPF2 of ARPF2-ARRS1 complex 0.03 OrthoFinder output from all 47 species
Mp4g01500.1 No alias component ARPF2 of ARPF2-ARRS1 complex 0.03 OrthoFinder output from all 47 species
Pp3c4_19370V3.1 Pp3c4_19370 Ribosomal RNA processing Brix domain protein 0.03 OrthoFinder output from all 47 species
Sam_g11434 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.02 OrthoFinder output from all 47 species
Smo73689 No alias Ribosome production factor 2 homolog OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Solyc10g083600.2.1 Solyc10g083600 component ARPF2 of ARPF2-ARRS1 complex 0.06 OrthoFinder output from all 47 species
Tin_g41919 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.03 OrthoFinder output from all 47 species
Zm00001e032080_P001 Zm00001e032080 component ARPF2 of ARPF2-ARRS1 complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000731 DNA synthesis involved in DNA repair IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004819 glutamine-tRNA ligase activity IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006188 IMP biosynthetic process IEP HCCA
BP GO:0006189 'de novo' IMP biosynthetic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046040 IMP metabolic process IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007109 Brix 35 232
No external refs found!