Azfi_s0384.g067487 (ARF8, ATARF8)

Aliases : ARF8, ATARF8

Description : ARF-type transcription factor & original description: CDS=233-2443

Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0384.g067487

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00025p00198750	ARF19, IAA22,...	RNA biosynthesis.transcriptional activation.B3...	0.02	OrthoFinder output from all 47 species
AMTR_s00029p00157690	ARF6,...	RNA biosynthesis.transcriptional activation.B3...	0.03	OrthoFinder output from all 47 species
AMTR_s00057p00141830	HSS, ARF1-BP,...	RNA biosynthesis.transcriptional activation.B3...	0.02	OrthoFinder output from all 47 species
AMTR_s00061p00077000	ARF18,...	Auxin response factor 18 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s00092p00072950	ARF6,...	RNA biosynthesis.transcriptional activation.B3...	0.03	OrthoFinder output from all 47 species
AMTR_s00211p00025860	MP, IAA24, ARF5,...	RNA biosynthesis.transcriptional activation.B3...	0.03	OrthoFinder output from all 47 species
AT1G19850	MP, IAA24, ARF5	Transcriptional factor B3 family protein /...	0.07	OrthoFinder output from all 47 species
AT1G59750	ARF1	auxin response factor 1	0.06	OrthoFinder output from all 47 species
AT2G33860	ARF3, ETT	Transcriptional factor B3 family protein /...	0.08	OrthoFinder output from all 47 species
AT5G37020	ARF8, ATARF8	auxin response factor 8	0.07	OrthoFinder output from all 47 species
AT5G60450	ARF4	auxin response factor 4	0.04	OrthoFinder output from all 47 species
Adi_g024483	ARF19, IAA22, ARF11	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g025684	ARF9	ARF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g057044	HSS, ARF1-BP, ARF2, ORE14	ARF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g088063	ARF6	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g103007	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g27966	ARF6	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g11014	HSS, ARF1-BP, ARF2, ORE14	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g14726	ARF6	ARF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g32730	TIR5, MSG1,...	ARF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g41559	ARF19, IAA22, ARF11	ARF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g22075	ARF6	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g12700	ARF6	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene45721.t2	ARF6, Aspi01Gene45721	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0065.g035933	ARF6	not classified & original description: CDS=1-678	0.02	OrthoFinder output from all 47 species
Azfi_s0065.g035934	No alias	not classified & original description: CDS=1-342	0.02	OrthoFinder output from all 47 species
Ceric.30G022300.1	ARF6, Ceric.30G022300	ARF-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.35G054000.1	ARF6, Ceric.35G054000	ARF-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g05759	ARF6	ARF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g07132	HSS, ARF1-BP, ARF2, ORE14	ARF-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Dac_g32674	TIR5, MSG1,...	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g11626	HSS, ARF1-BP, ARF2, ORE14	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g09204	ARF6	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g18587	ARF16	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g20778	ARF14	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g26859	ARF19, IAA22, ARF11	ARF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g30682	ARF10	ARF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01011008001	HSS, ARF1-BP, ARF2, ORE14	RNA biosynthesis.transcriptional activation.B3...	0.03	OrthoFinder output from all 47 species
GSVIVT01021552001	ARF6	RNA biosynthesis.transcriptional activation.B3...	0.04	OrthoFinder output from all 47 species
GSVIVT01025198001	ARF10	RNA biosynthesis.transcriptional activation.B3...	0.02	OrthoFinder output from all 47 species
GSVIVT01035204001	ARF8, ATARF8	RNA biosynthesis.transcriptional activation.B3...	0.04	OrthoFinder output from all 47 species
GSVIVT01035205001	ARF8, ATARF8	Auxin response factor 12 OS=Oryza sativa subsp. japonica	0.04	OrthoFinder output from all 47 species
Gb_33804	ARF16	transcription factor (ARF)	0.02	OrthoFinder output from all 47 species
Gb_39686	ARF6	transcription factor (ARF)	0.03	OrthoFinder output from all 47 species
LOC_Os01g48060.1	ARF3, ETT, LOC_Os01g48060	transcription factor (ARF)	0.04	OrthoFinder output from all 47 species
LOC_Os04g36054.1	ARF1, LOC_Os04g36054	transcription factor (ARF)	0.04	OrthoFinder output from all 47 species
LOC_Os04g43910.1	ARF10, LOC_Os04g43910	transcription factor (ARF)	0.04	OrthoFinder output from all 47 species
LOC_Os04g56850.1	MP, IAA24, ARF5,...	transcription factor (ARF)	0.04	OrthoFinder output from all 47 species
LOC_Os05g43920.1	ARF3, ETT, LOC_Os05g43920	transcription factor (ARF)	0.04	OrthoFinder output from all 47 species
LOC_Os11g32110.1	HSS, ARF1-BP,...	transcription factor (ARF)	0.03	OrthoFinder output from all 47 species
Len_g17368	ARF6	ARF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g03495	ARF6	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g39711	ARF6	transcriptional repressor *(IAA/AUX) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g13614	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Pir_g33451	ARF10	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002378	ARF1	ARF-type transcription factor & original description:...	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010740	TIR5, MSG1,...	ARF-type transcription factor & original description: CDS=1-2400	0.04	OrthoFinder output from all 47 species
Solyc04g081240.2.1	MP, IAA24, ARF5,...	transcription factor (ARF)	0.03	OrthoFinder output from all 47 species
Solyc06g075150.3.1	ARF16, Solyc06g075150	transcription factor (ARF)	0.03	OrthoFinder output from all 47 species
Solyc07g042260.4.1	ARF19, IAA22,...	transcription factor (ARF)	0.03	OrthoFinder output from all 47 species
Solyc08g008380.4.1	ARF9, Solyc08g008380	transcription factor (ARF)	0.04	OrthoFinder output from all 47 species
Solyc11g069190.2.1	ARF4, Solyc11g069190	transcription factor (ARF)	0.04	OrthoFinder output from all 47 species
Spa_g26009	ARF6	ARF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g29254	HSS, ARF1-BP, ARF2, ORE14	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g55449	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g27871	HSS, ARF1-BP, ARF2, ORE14	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e003229_P002	ARF6, Zm00001e003229	transcription factor (ARF)	0.03	OrthoFinder output from all 47 species
Zm00001e006577_P003	ARF8, ATARF8,...	transcription factor (ARF)	0.04	OrthoFinder output from all 47 species
Zm00001e006640_P002	MP, IAA24, ARF5,...	transcription factor (ARF)	0.02	OrthoFinder output from all 47 species
Zm00001e012670_P001	ARF16, Zm00001e012670	transcription factor (ARF)	0.02	OrthoFinder output from all 47 species
Zm00001e013061_P001	ARF16, Zm00001e013061	transcription factor (ARF)	0.03	OrthoFinder output from all 47 species
Zm00001e013639_P001	ARF19, IAA22,...	transcription factor (ARF)	0.03	OrthoFinder output from all 47 species
Zm00001e014833_P002	ARF1, Zm00001e014833	transcription factor (ARF)	0.03	OrthoFinder output from all 47 species
Zm00001e016366_P002	ARF11, Zm00001e016366	transcription factor (ARF)	0.03	OrthoFinder output from all 47 species
Zm00001e018126_P002	ARF6, Zm00001e018126	transcription factor (ARF)	0.03	OrthoFinder output from all 47 species
Zm00001e030325_P003	ARF6, Zm00001e030325	transcription factor (ARF)	0.05	OrthoFinder output from all 47 species
Zm00001e041866_P001	MP, IAA24, ARF5,...	transcription factor (ARF)	0.02	OrthoFinder output from all 47 species
Zm00001e041910_P003	ARF8, ATARF8,...	transcription factor (ARF)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	IEA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0006401	RNA catabolic process	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
CC	GO:0032299	ribonuclease H2 complex	IEP	HCCA
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR033389	AUX/IAA_dom	607	698
IPR003340	B3_DNA-bd	133	234
IPR010525	ARF_dom	270	318

External Links

No external refs found!

Azfi_s0384.g067487 (ARF8, ATARF8)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation