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  5. Azfi_s0381.g067390

Azfi_s0381.g067390


Description : not classified & original description: CDS=72-2246


Gene families : OG0008000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0381.g067390
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
Adi_g009515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g28536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 313 342
IPR002885 Pentatricopeptide_repeat 228 284
IPR002885 Pentatricopeptide_repeat 533 579
IPR002885 Pentatricopeptide_repeat 649 697
IPR002885 Pentatricopeptide_repeat 580 626
No external refs found!