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  5. Azfi_s0373.g067190

Azfi_s0373.g067190 (ERD4)


Aliases : ERD4

Description : calcium-permeable channel *(OSCA) & original description: CDS=237-2576


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0373.g067190

Target Alias Description ECC score Gene Family Method Actions
AT1G11960 No alias ERD (early-responsive to dehydration stress) family protein 0.03 OrthoFinder output from all 47 species
AT3G21620 No alias ERD (early-responsive to dehydration stress) family protein 0.03 OrthoFinder output from all 47 species
Als_g33129 No alias calcium-permeable channel *(OSCA) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene21987.t1 HYP1, ATHYP1,... calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Cre08.g360500 No alias CSC1-like protein At1g62320 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dde_g12509 No alias calcium-permeable channel *(OSCA) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g28230 ERD4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009282001 RXW8 Solute transport.channels.OSCA calcium-permeable channel 0.03 OrthoFinder output from all 47 species
GSVIVT01012666001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.03 OrthoFinder output from all 47 species
LOC_Os05g51630.1 LOC_Os05g51630 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
LOC_Os12g39320.1 HYP1, ATHYP1,... calcium-permeable channel (OSCA) 0.05 OrthoFinder output from all 47 species
Len_g31407 ERD4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09013 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
MA_78696g0010 ERD4 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
Msp_g14451 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g17620 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.07 OrthoFinder output from all 47 species
Pp3c8_3900V3.1 Pp3c8_3900 ERD (early-responsive to dehydration stress) family protein 0.02 OrthoFinder output from all 47 species
Solyc02g081030.4.1 Solyc02g081030 calcium-permeable channel (OSCA) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR003864 CSC1/OSCA1-like_7TM 418 687
IPR027815 CSC1/OSCA1-like_cyt 218 328
IPR032880 Csc1/OSCA1-like_N 5 196
No external refs found!