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  5. Azfi_s0370.g067092

Azfi_s0370.g067092


Description : not classified & original description: CDS=34-3717


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0370.g067092
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00130p00019530 DOT4,... Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g036834 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13651 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g24804 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g13524 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27009 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29693 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene39631.t1 CRR2, Aspi01Gene39631 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55921.t1 OTP82, Aspi01Gene55921 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene65890.t1 Aspi01Gene65890 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0012.g012913 No alias not classified & original description: CDS=1-2943 0.05 OrthoFinder output from all 47 species
Azfi_s0108.g045187 No alias not classified & original description: CDS=1-2178 0.05 OrthoFinder output from all 47 species
Azfi_s0251.g060280 No alias not classified & original description: CDS=1-3180 0.07 OrthoFinder output from all 47 species
Azfi_s0758.g085492 No alias not classified & original description: CDS=1-2652 0.04 OrthoFinder output from all 47 species
Azfi_s1087.g097170 CRR2 not classified & original description: CDS=372-1700 0.08 OrthoFinder output from all 47 species
Azfi_s1562.g104338 OTP84 not classified & original description: CDS=59-2905 0.04 OrthoFinder output from all 47 species
Azfi_s3130.g114639 No alias not classified & original description: CDS=34-2442 0.05 OrthoFinder output from all 47 species
Cba_g07752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g71700 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G025700.1 Ceric.12G025700 not classified & original description: pacid=50601618... 0.04 OrthoFinder output from all 47 species
Ceric.23G075300.1 Ceric.23G075300 not classified & original description: pacid=50609898... 0.02 OrthoFinder output from all 47 species
Ceric.39G011500.1 Ceric.39G011500 not classified & original description: pacid=50582697... 0.03 OrthoFinder output from all 47 species
Dde_g02941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21829 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_15811 No alias Pentatricopeptide repeat-containing protein At2g39620... 0.06 OrthoFinder output from all 47 species
Len_g12067 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55202 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo118770 No alias Pentatricopeptide repeat-containing protein At4g14050,... 0.04 OrthoFinder output from all 47 species
Smo97289 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Tin_g17816 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e023498_P001 VAC1, ECB2,... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e041048_P001 OTP86, Zm00001e041048 RNA editing factor (OTP86) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 445 491
IPR002885 Pentatricopeptide_repeat 649 695
IPR002885 Pentatricopeptide_repeat 751 797
IPR002885 Pentatricopeptide_repeat 546 593
IPR002885 Pentatricopeptide_repeat 1056 1104
IPR002885 Pentatricopeptide_repeat 853 899
IPR002885 Pentatricopeptide_repeat 342 390
IPR002885 Pentatricopeptide_repeat 955 1002
IPR002885 Pentatricopeptide_repeat 240 288
IPR002885 Pentatricopeptide_repeat 827 851
IPR002885 Pentatricopeptide_repeat 317 340
IPR002885 Pentatricopeptide_repeat 1133 1158
IPR002885 Pentatricopeptide_repeat 521 544
No external refs found!