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  5. Azfi_s0345.g065822

Azfi_s0345.g065822 (SDH2-2)


Aliases : SDH2-2

Description : RGF precursor polypeptide & original description: CDS=1-1299


Gene families : OG0003220 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003220_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0345.g065822
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Aev_g13631 SDH2-2 iron-sulphur component *(SDH2) of succinate... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021531.14 SDH2-1 Cellular respiration.tricarboxylic acid cycle.succinate... 0.02 OrthoFinder output from all 47 species
Gb_26249 SDH2-2 iron-sulphur component SDH2 of succinate dehydrogenase complex 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008501 SDH2-2 iron-sulphur component *(SDH2) of succinate... 0.05 OrthoFinder output from all 47 species
Sam_g17978 No alias iron-sulphur component *(SDH2) of succinate... 0.03 OrthoFinder output from all 47 species
Spa_g25180 SDH2-2 iron-sulphur component *(SDH2) of succinate... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004107 chorismate synthase activity IEP HCCA
MF GO:0004819 glutamine-tRNA ligase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR025192 Succ_DH/fum_Rdtase_N 199 304
No external refs found!