1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc09g007810.3.1

Solyc09g007810.3.1 (Solyc09g007810.3)


Aliases : Solyc09g007810.3

Description : 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family Involved in root cap cell differentiation. Gene expression is regulated by mir160.Located in the nucleus. auxin response factor 16 (ARF16)


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc09g007810.3.1
Cluster HCCA cluster: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020904.93 No alias No description available 0.02 Gene family
GSVIVT01025691001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.07 Gene family
LOC_Os04g36054 Os04g0442000 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
Smo117217 PACid_15403898 No description available 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010525 Auxin_resp 287 370
IPR003340 B3_DNA-bd 121 222
No external refs found!