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  5. Azfi_s0338.g065594

Azfi_s0338.g065594 (RNEE/G)


Aliases : RNEE/G

Description : endoribonuclease *(RNase E) & original description: CDS=133-4767


Gene families : OG0005953 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005953_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0338.g065594

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00182640 RNEE/G,... RNA processing.organelle machineries.ribonuclease... 0.03 OrthoFinder output from all 47 species
Aev_g13689 RNEE/G endoribonuclease *(RNase E) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15862 RNEE/G endoribonuclease *(RNase E) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02405 RNEE/G endoribonuclease *(RNase E) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30754 RNEE/G endoribonuclease *(RNase E) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10909g0010 RNEE/G endoribonuclease (RNase E) 0.03 OrthoFinder output from all 47 species
Mp7g15630.1 RNEE/G endoribonuclease (RNase E) 0.06 OrthoFinder output from all 47 species
Solyc02g083140.3.1 RNEE/G, Solyc02g083140 endoribonuclease (RNase E) 0.04 OrthoFinder output from all 47 species
Spa_g28906 RNEE/G endoribonuclease *(RNase E) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19266 RNEE/G endoribonuclease *(RNase E) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003867_P004 RNEE/G, Zm00001e003867 endoribonuclease (RNase E) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:2001070 starch binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002044 CBM_fam20 611 702
IPR019307 RNA-bd_AU-1/RNase_E/G 1104 1382
No external refs found!